Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907709.1_cds_XP_016457826.1_51517
CDS Infomation

[gene=LOC107781604] [db_xref=GeneID:107781604] [protein=low-temperature-induced cysteine proteinase-like] [protein_id=XP_016457826.1] [location=complement(join(146795..146890,147090..147539,148193..148333,148431..148666,149793..150270))] [gbkey=CDS]
Sequence

ATGGCAACTCTTAGCTTTACTCTCACCATATCCCTACTTCTCCTCCTCTTCTTATTCTTC
TCCACCTTATCTTCCGCTTCCGACATGTCCATCTTAACCTACGATGAAAACCAACACTTT
CGAACGGACGATGAAGTCATGTCCTTGTACGAGTCATGGCTAGTCGAACATGGAAAATCG
TACAACGCCTTAGACGAAAAAGACAAGCGGTTTCAGATCTTTAAAGAAAACCTAAGATAC
ATAGATGAACAGAACTCTGTTCCAAACAAGAGTTACAAGCTTGGTTTAACCAAATTTGCT
GATCTGACTAACGAGGAGTACAGGTCCATGTACTTGGGTACTAAAACCAGTGATCGTCGC
AGGTTGTTAAAGAACAAAAGCGATCGGTATCTTCCTAAAGTTGGGGATAGCTTGCCGGAC
TCAGTTGATTGGAGAGAGAAAGGTGTTCTTGTTGGAGTTAAGGATCAAGGAAGCTGTGGG
AGTTGTTGGGCATTCTCTGCAATTGCTTCCGTTGAAGCAGTGAACTCAATAGTAACCGGA
GATGTGATTTCACTATCGGAGCAAGAGCTGGTGGATTGCGATACTTCCTACAATGACGGT
TGCAATGGCGGTCTTATGGACTACGCTTTTGATTTCATCATAAAAAATGGAGGAATTGAC
ACTGAAGAAGATTATCCTTACACAGGCCGTGATGGCAGATGTGACCAGTCAAGGAAAAAT
GCCAAGGTTGTTACCATAAATGGGTACGAAGATGTTCCTGAAAATAATGAAAAGGCACTG
CAAAAGGCTGTTGCAAGTCAACCTGTGAGCATTGCCATTGAAGCTGGTGGCAAAGACTTT
CAACACTATGTATCGGGTATTTTTACTGGAAAATGTGGAACTGCAGTGGACCATGGTGTG
GTTGCTGTTGGATATGGTAGTGAGAATGGTATGGATTATTGGATTATTAGGAACTCTTGG
GGTGCTTCTTGGGGAGAGAAAGGTTACCTTCGCGTTCAACGTAACGTCGCCAGTTCTAAA
GGTTTGTGTGGATTAGCCATAGAGCCTTCTTACCCAGTCAAGACAGGCGTAAATCCCCCT
AAACCTAGTCCATCTCCTCCATCGCCAATCAAGCCACCTACTCAGTGTGATGATTATGCT
CAATGCCCTGAGGGTACCACTTGCTGTTGTGTCTTTGAATACTATAACTCCTGCTTCTCT
TGGGGATGTTGCCCTCTTGAAGGAGCCACTTGCTGTGAAGATCACTACAGTTGTTGTCCG
CACGACTATCCTGTTTGCAACGTTCGTGCAGGCACCTGCTCAATTAGCAAGAACAACCCA
CTGGGAGTGAAGGCAATGAAGCACATTCTTGCTGAACCAATTGGGGCCTTCATAAATGGA
GGAAAGAAGAGCAGTTCTTGA

Peptide Sequence

PEP ID

XP_016457826.1
PEP Infomation

PREDICTED: low-temperature-induced cysteine proteinase-like [Nicotiana tabacum]
Sequence

MATLSFTLTISLLLLLFLFFSTLSSASDMSILTYDENQHFRTDDEVMSLYESWLVEHGKS
YNALDEKDKRFQIFKENLRYIDEQNSVPNKSYKLGLTKFADLTNEEYRSMYLGTKTSDRR
RLLKNKSDRYLPKVGDSLPDSVDWREKGVLVGVKDQGSCGSCWAFSAIASVEAVNSIVTG
DVISLSEQELVDCDTSYNDGCNGGLMDYAFDFIIKNGGIDTEEDYPYTGRDGRCDQSRKN
AKVVTINGYEDVPENNEKALQKAVASQPVSIAIEAGGKDFQHYVSGIFTGKCGTAVDHGV
VAVGYGSENGMDYWIIRNSWGASWGEKGYLRVQRNVASSKGLCGLAIEPSYPVKTGVNPP
KPSPSPPSPIKPPTQCDDYAQCPEGTTCCCVFEYYNSCFSWGCCPLEGATCCEDHYSCCP
HDYPVCNVRAGTCSISKNNPLGVKAMKHILAEPIGAFINGGKKSSS

Transcript Sequence

Gene sequence data has not been registered.